AMTR_s00168p00063320 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00168.23

Description : Solute transport.carrier-mediated transport.IT superfamily.putative silicon efflux transporter (LSI2-type)

Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00168p00063320

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_28693	No alias	putative silicon efflux transporter (LSI2)	0.03	OrthoFinder output from all 47 species
Tin_g02811	No alias	putative silicon efflux transporter *(LSI2) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004680	Cit_transptr-like_dom	18	266

External Links

No external refs found!