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  5. AMTR_s00160p00071720

AMTR_s00160p00071720 (AAC2,...)


Aliases : AAC2, evm_27.TU.AmTr_v1.0_scaffold00160.25

Description : Solute transport.carrier-mediated transport.MC-type solute transporter


Gene families : OG0000387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00160p00071720

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00136p00112710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MC-type... 0.03 OrthoFinder output from all 47 species
Adi_g111398 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z188200.1 ATAAC3, AAC3,... solute transporter *(MTCC) & original description:... 0.03 OrthoFinder output from all 47 species
Gb_12321 ATAAC3, AAC3 solute transporter (MTCC) 0.04 OrthoFinder output from all 47 species
Pir_g02207 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036921_P001 AAC2, Zm00001e036921 solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 186 277
IPR018108 Mitochondrial_sb/sol_carrier 83 178
IPR018108 Mitochondrial_sb/sol_carrier 286 373
No external refs found!