Aliases : GATA11, evm_27.TU.AmTr_v1.0_scaffold00155.58
Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor
Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00056p00080350 | GATA9,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.05 | OrthoFinder output from all 47 species | |
AT2G28340 | GATA13 | GATA transcription factor 13 | 0.03 | OrthoFinder output from all 47 species | |
AT5G26930 | GATA23 | GATA transcription factor 23 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g058312 | GATA4 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g48787 | GATA12 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0078.g038241 | GATA4 | transcription factor *(A/B-GATA) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Cre01.g025050 | GATA23 | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g10781 | GATA9 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g04639 | GATA2 | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01018833001 | GATA5 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01035048001 | GATA15 | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g12790.1 | GATA22, CGA1,... | transcription factor (GATA) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g06340.1 | GATA23, LOC_Os05g06340 | transcription factor (GATA) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g37450.1 | GATA22, CGA1,... | transcription factor (GATA) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os12g42970.1 | GATA4, LOC_Os12g42970 | transcription factor (GATA) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g04851 | GATA22, CGA1, GNL | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g10622 | GATA9 | transcription factor *(A/B-GATA) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g03972 | GATA22, CGA1, GNL | transcription factor *(A/B-GATA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g14050 | GATA19 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g17490 | GATA12 | transcription factor *(A/B-GATA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0146.g023073 | GATA9 | transcription factor *(A/B-GATA) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Smo440037 | GNC, GATA21 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29922 | GATA12 | transcription factor *(A/B-GATA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e007391_P002 | GATA5, Zm00001e007391 | transcription factor (GATA) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e039468_P001 | Zm00001e039468 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039469_P001 | GATA12, Zm00001e039469 | transcription factor (GATA) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 400 | 433 |
No external refs found! |