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  5. AMTR_s00147p00076810

AMTR_s00147p00076810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00147.36

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-delta


Gene families : OG0004139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004139_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00147p00076810

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene35947.t1 Aspi01Gene35947 component *(eIF2B-delta) of eIF2B eIF2-GDP recycling... 0.02 OrthoFinder output from all 47 species
Cba_g17118 No alias component *(eIF2B-delta) of eIF2B eIF2-GDP recycling... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000361.76 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Cre12.g558650 No alias Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
LOC_Os12g42260.2 LOC_Os12g42260 component eIF2B-delta of eIF2B eIF2-GDP recycling complex 0.02 OrthoFinder output from all 47 species
Mp4g12680.1 No alias component eIF2B-delta of eIF2B eIF2-GDP recycling complex 0.03 OrthoFinder output from all 47 species
Solyc02g089810.3.1 Solyc02g089810 component eIF2B-delta of eIF2B eIF2-GDP recycling complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0044237 cellular metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005938 cell cortex IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0032065 maintenance of protein location in cell cortex IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
InterPro domains Description Start Stop
IPR000649 IF-2B-related 345 637
No external refs found!