1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00136p00018270

AMTR_s00136p00018270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00136.2

Description : Solute transport.carrier-mediated transport.MC-type solute transporter


Gene families : OG0002800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002800_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00136p00018270
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Aev_g15203 No alias solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03398 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00693 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012105 No alias solute transporter *(MTCC) & original description: CDS=1-1215 0.04 OrthoFinder output from all 47 species
Ceric.14G086100.1 Ceric.14G086100 solute transporter *(MTCC) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g46569 No alias solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23734 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02161 No alias solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06188 No alias solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19738 No alias solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018243 No alias solute transporter *(MTCC) & original description: CDS=292-1803 0.03 OrthoFinder output from all 47 species
Zm00001e038825_P001 Zm00001e038825 solute transporter (MTCC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 211 297
IPR018108 Mitochondrial_sb/sol_carrier 33 101
IPR018108 Mitochondrial_sb/sol_carrier 108 194
No external refs found!