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  5. AMTR_s00131p00115550

AMTR_s00131p00115550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00131.88

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00115550

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00025840 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.05 OrthoFinder output from all 47 species
Aev_g14305 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01615 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05171 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.37G027000.1 Ceric.37G027000 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g13296 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_17217 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Len_g04743 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18502 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04774 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18897 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g49091 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09993 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18141 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g049980.3.1 Solyc05g049980 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Spa_g14594 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034257_P001 Zm00001e034257 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 166 291
No external refs found!