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  5. AMTR_s00123p00050310

AMTR_s00123p00050310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00123.2

Description : Peroxidase 29 OS=Arabidopsis thaliana


Gene families : OG0001066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00123p00050310
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT3G17070 No alias Peroxidase family protein 0.03 OrthoFinder output from all 47 species
Aev_g16977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34300.t1 Aspi01Gene34300 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G056200.1 Ceric.11G056200 not classified & original description: pacid=50594892... 0.06 OrthoFinder output from all 47 species
Dac_g11516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g00442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g02680.1 No alias Peroxidase 29 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g07600.1 No alias Peroxidase 29 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g05300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49270 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA Interproscan
BP GO:0006979 response to oxidative stress IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002016 Haem_peroxidase 37 281
No external refs found!