AMTR_s00122p00117310 (ABCG40, PDR12,...)

Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, evm_27.TU.AmTr_v1.0_scaffold00122.54

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00122p00117310
Cluster	HCCA: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
Aev_g21077	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01017337001	ABCG40, PDR12,...	ABC transporter G family member 40 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01017676001	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
GSVIVT01031314001	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_04573	PEN3, ABCG36,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Gb_28918	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Gb_37005	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Gb_37007	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os08g43120.1	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_921943g0010	ABCG40, PDR12,...	ABC transporter G family member 44 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Mp2g07030.1	PDR6, ATPDR6	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Ore_g19750	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g08076	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20429	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g09231	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g07220	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo441720	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Tin_g31248	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004550	nucleoside diphosphate kinase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006183	GTP biosynthetic process	IEP	HCCA
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	HCCA
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006228	UTP biosynthetic process	IEP	HCCA
BP	GO:0006241	CTP biosynthetic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006788	heme oxidation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009147	pyrimidine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009148	pyrimidine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009208	pyrimidine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009209	pyrimidine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	HCCA
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042168	heme metabolic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0046036	CTP metabolic process	IEP	HCCA
BP	GO:0046039	GTP metabolic process	IEP	HCCA
BP	GO:0046051	UTP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013581	PDR_assoc	707	770
IPR003439	ABC_transporter-like_ATP-bd	894	1022
IPR003439	ABC_transporter-like_ATP-bd	178	335
IPR013525	ABC_2_trans	1167	1381
IPR013525	ABC_2_trans	490	702

External Links

No external refs found!

AMTR_s00122p00117310 (ABCG40, PDR12,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation