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  5. AMTR_s00109p00125300

AMTR_s00109p00125300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.126

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-alpha component


Gene families : OG0003497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00125300

Target Alias Description ECC score Gene Family Method Actions
AT2G40290 No alias Eukaryotic translation initiation factor 2 subunit 1 0.03 OrthoFinder output from all 47 species
AT5G05470 ATEIF2-A2,... eukaryotic translation initiation factor 2 alpha subunit 0.03 OrthoFinder output from all 47 species
Azfi_s0230.g059165 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Cre12.g490000 No alias Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Dac_g15381 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
GSVIVT01032762001 No alias Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
LOC_Os03g18510.1 LOC_Os03g18510 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.04 OrthoFinder output from all 47 species
Mp2g08380.1 No alias component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species
Solyc03g095840.3.1 Solyc03g095840 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e001345_P001 Zm00001e001345 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species
Zm00001e038398_P001 Zm00001e038398 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005850 eukaryotic translation initiation factor 2 complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0004828 serine-tRNA ligase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006434 seryl-tRNA aminoacylation IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 19 92
IPR011488 TIF_2_asu 129 260
No external refs found!