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  5. AMTR_s00106p00080300

AMTR_s00106p00080300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.53

Description : Protein degradation.peptidase families.cysteine-type peptidase activities.PPPDE-type peptidase


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00080300
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G47740 No alias PPPDE putative thiol peptidase family protein 0.04 OrthoFinder output from all 47 species
AT1G80690 No alias PPPDE putative thiol peptidase family protein 0.03 OrthoFinder output from all 47 species
Aev_g06453 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09173 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04241 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0041.g026790 No alias deubiquitinase & original description: CDS=431-1120 0.02 OrthoFinder output from all 47 species
Dcu_g04527 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03273 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05454 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009662001 No alias Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
GSVIVT01031921001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
LOC_Os03g10200.1 LOC_Os03g10200 peptidase (PPPDE) 0.05 OrthoFinder output from all 47 species
Lfl_g04612 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431115g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10431766g0010 No alias peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species
Pir_g11531 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08094 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g109430.3.1 Solyc01g109430 peptidase (PPPDE) 0.09 OrthoFinder output from all 47 species
Solyc03g117100.3.1 Solyc03g117100 peptidase (PPPDE) 0.01 OrthoFinder output from all 47 species
Zm00001e000776_P001 Zm00001e000776 peptidase (PPPDE) 0.04 OrthoFinder output from all 47 species
Zm00001e038787_P002 Zm00001e038787 peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 61 190
No external refs found!