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  5. AMTR_s00099p00153900

AMTR_s00099p00153900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.145

No description available


Gene families : OG0000014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00153900
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Aop_g27102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19644.t1 Aspi01Gene19644 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20260.t1 Aspi01Gene20260 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37427.t1 Aspi01Gene37427 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43345.t1 Aspi01Gene43345 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51284.t1 Aspi01Gene51284 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G020000.1 Ceric.25G020000 not classified & original description: pacid=50594411... 0.01 OrthoFinder output from all 47 species
Msp_g42230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!