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  5. AMTR_s00097p00093040

AMTR_s00097p00093040 (HS, HWS,...)


Aliases : HS, HWS, evm_27.TU.AmTr_v1.0_scaffold00097.20

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0002958 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00097p00093040

Target Alias Description ECC score Gene Family Method Actions
AT3G61590 HS, HWS Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g114783 HS, HWS substrate adaptor *(HWS) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g19982 HS, HWS substrate adaptor *(HWS) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g15723 HS, HWS substrate adaptor *(HWS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.26G065800.1 HS, HWS, Ceric.26G065800 substrate adaptor *(HWS) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ehy_g18426 HS, HWS substrate adaptor *(HWS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g30561 HS, HWS substrate adaptor *(HWS) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!