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  5. AMTR_s00095p00086130

AMTR_s00095p00086130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00095.49

Description : RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RNC1 ribonuclease


Gene families : OG0004387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00095p00086130
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Sam_g14760 No alias ribonuclease *(RNC1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004525 ribonuclease III activity IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
InterPro domains Description Start Stop
IPR000999 RNase_III_dom 451 515
No external refs found!