AMTR_s00095p00016160 (HSFB4, SCZ, AT-HSFB4,...)

Aliases : HSFB4, SCZ, AT-HSFB4, evm_27.TU.AmTr_v1.0_scaffold00095.3

Description : RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00095p00016160

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00073p00033500	HSFB4, SCZ,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.05	OrthoFinder output from all 47 species
Aev_g41017	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g09418	ATHSFA1D, HSFA1D	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g07805	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g14735	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g59731	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g21536	HSFA1E, ATHSFA1E	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g26655	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene71625.t1	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g11746	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g03864	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g35911	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10301	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13990	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01016067001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Gb_05885	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os09g28200.1	HSFB4, SCZ,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
MA_8845456g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Msp_g01022	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g02775	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g53549	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g60061	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021246	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-1665	0.02	OrthoFinder output from all 47 species
Spa_g55869	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e027464_P001	HSF A4A,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0001932	regulation of protein phosphorylation	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0019220	regulation of phosphate metabolic process	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
BP	GO:0031399	regulation of protein modification process	IEP	HCCA
BP	GO:0042325	regulation of phosphorylation	IEP	HCCA
BP	GO:0043549	regulation of kinase activity	IEP	HCCA
BP	GO:0045859	regulation of protein kinase activity	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051338	regulation of transferase activity	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	25	117

External Links

No external refs found!

AMTR_s00095p00016160 (HSFB4, SCZ, AT-HSFB4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation