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  5. AMTR_s00089p00116260

AMTR_s00089p00116260 (AtWRKY20, WRKY20,...)


Aliases : AtWRKY20, WRKY20, evm_27.TU.AmTr_v1.0_scaffold00089.64

No description available


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00089p00116260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00201830 ATWRKY40,... RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
AT1G29860 ATWRKY71, WRKY71 WRKY DNA-binding protein 71 0.04 OrthoFinder output from all 47 species
Adi_g117326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31687.t1 WRKY28,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52797.t2 Aspi01Gene52797 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54083.t1 WRKY6, ATWRKY6,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64694.t1 WRKY6, ATWRKY6,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010734 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: CDS=1-1518 0.05 OrthoFinder output from all 47 species
Cba_g01943 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67876 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18032 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26985 No alias WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42615 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44250 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011356001 WRKY72, ATWRKY72 RNA biosynthesis.transcriptional activation.WRKY... 0.04 OrthoFinder output from all 47 species
LOC_Os01g09100.1 ATWRKY50,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os05g45230.1 WRKY43,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
MA_23415g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
MA_47052g0010 WRKY42, AtWRKY42 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_6790522g0010 WRKY42, AtWRKY42 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
MA_7513437g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
MA_892467g0010 WRKY72, ATWRKY72 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Nbi_g16493 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26988 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18429 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g051540.3.1 ATWRKY13,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc09g010960.3.1 WRKY49,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Solyc10g084380.1.1 WRKY4, Solyc10g084380 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Tin_g03844 No alias WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027804_P001 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e029092_P002 ATWRKY24,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e032189_P001 WRKY56,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!