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  5. AMTR_s00088p00076720

AMTR_s00088p00076720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00088.45

Description : RING-H2 finger protein ATL48 OS=Arabidopsis thaliana


Gene families : OG0008861 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008861_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00088p00076720
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Adi_g025921 No alias regulatory chaperone *(HIGD1) of component COX3 of... 0.02 OrthoFinder output from all 47 species
Ore_g16764 No alias regulatory chaperone *(HIGD1) of component COX3 of... 0.02 OrthoFinder output from all 47 species
Zm00001e033998_P001 Zm00001e033998 RING-H2 finger protein ATL48 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004150 dihydroneopterin aldolase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR007667 Hypoxia_induced_domain 26 76
No external refs found!