1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00086p00150620

AMTR_s00086p00150620 (ORP2A,...)


Aliases : ORP2A, evm_27.TU.AmTr_v1.0_scaffold00086.89

Description : Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana


Gene families : OG0001490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001490_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00086p00150620
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT2G31020 ORP1A OSBP(oxysterol binding protein)-related protein 1A 0.03 OrthoFinder output from all 47 species
Als_g20575 ORP1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02250 ORP1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26101 ORP1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70510.t1 ORP1C, Aspi01Gene70510 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0329.g065350 ORP1C not classified & original description: CDS=1-2604 0.02 OrthoFinder output from all 47 species
Dde_g09896 ORP1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001291001 ORP2A Oxysterol-binding protein-related protein 2A... 0.03 OrthoFinder output from all 47 species
LOC_Os03g49770.1 ORP1C, LOC_Os03g49770 Oxysterol-binding protein-related protein 1C... 0.02 OrthoFinder output from all 47 species
LOC_Os10g40590.1 ORP2A, LOC_Os10g40590 Oxysterol-binding protein-related protein 2A... 0.03 OrthoFinder output from all 47 species
LOC_Os12g18770.1 ORP1D, LOC_Os12g18770 Oxysterol-binding protein-related protein 1D... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007237 ORP1C not classified & original description: CDS=286-2850 0.02 OrthoFinder output from all 47 species
Solyc11g013190.2.1 ORP1C, Solyc11g013190 Oxysterol-binding protein-related protein 1C... 0.03 OrthoFinder output from all 47 species
Solyc12g010510.2.1 ORP1C, Solyc12g010510 Oxysterol-binding protein-related protein 1C... 0.03 OrthoFinder output from all 47 species
Zm00001e002310_P002 ORP2A, Zm00001e002310 Oxysterol-binding protein-related protein 2A... 0.02 OrthoFinder output from all 47 species
Zm00001e039112_P001 ORP2A, Zm00001e039112 Oxysterol-binding protein-related protein 2A... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004152 dihydroorotate dehydrogenase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006222 UMP biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP HCCA
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046049 UMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000648 Oxysterol-bd 248 600
No external refs found!