AMTR_s00079p00183380 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00079.103

No description available

Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00079p00183380
Cluster	HCCA: Cluster_68

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.03	OrthoFinder output from all 47 species
AMTR_s00066p00199730	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT2G43610	No alias	Chitinase family protein	0.04	OrthoFinder output from all 47 species
Adi_g026236	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g115474	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g12023	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g38872	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g35678	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene23821.t1	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32119.t1	HCHIB, B-CHI,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g38491	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01038111001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01038116001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_07463	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
Gb_20767	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.06	OrthoFinder output from all 47 species
Gb_29991	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
Gb_29992	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
Gb_29993	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Gb_34557	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os05g33130.1	HCHIB, B-CHI,...	Chitinase 2 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Len_g56980	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g25481	ATEP3, EP3,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.05	OrthoFinder output from all 47 species
MA_10313114g0010	HCHIB, B-CHI,...	Endochitinase B OS=Nicotiana tabacum...	0.02	OrthoFinder output from all 47 species
MA_10427514g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_10430424g0010	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_114934g0010	ATEP3, EP3,...	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_170598g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
MA_18470g0010	HCHIB, B-CHI,...	Basic endochitinase C OS=Secale cereale...	0.03	OrthoFinder output from all 47 species
MA_18470g0020	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum (sp\|p21226\|chi2_pea : 201.0)	0.03	OrthoFinder output from all 47 species
MA_191308g0010	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_381956g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_4970836g0010	HCHIB, B-CHI,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_5029466g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_741127g0010	No alias	Endochitinase At2g43610 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_8921185g0010	HCHIB, B-CHI,...	Basic endochitinase C OS=Secale cereale...	0.05	OrthoFinder output from all 47 species
MA_9682123g0010	ATEP3, EP3,...	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
MA_9952704g0010	HCHIB, B-CHI,...	Endochitinase OS=Phaseolus vulgaris...	0.03	OrthoFinder output from all 47 species
Pir_g47276	ATEP3, EP3,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pp3c1_30410V3.1	Pp3c1_30410	chitinase, putative	0.02	OrthoFinder output from all 47 species
Ppi_g32610	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g57704	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60890	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g60891	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g082920.4.1	HCHIB, B-CHI,...	Acidic 26 kDa endochitinase OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Solyc02g082930.3.1	HCHIB, B-CHI,...	Acidic 27 kDa endochitinase OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Solyc07g009530.1.1	HCHIB, B-CHI,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc10g055800.2.1	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
Solyc10g055810.2.1	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005319	lipid transporter activity	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006071	glycerol metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0017089	glycolipid transfer activity	IEP	HCCA
BP	GO:0019400	alditol metabolic process	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0046836	glycolipid transport	IEP	HCCA
MF	GO:0051861	glycolipid binding	IEP	HCCA
MF	GO:0120013	lipid transfer activity	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	48	80

External Links

No external refs found!

AMTR_s00079p00183380 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation