AMTR_s00078p00192630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00078.201

No description available


Gene families : OG0004684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004684_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00078p00192630

Target Alias Description ECC score Gene Family Method Actions
AT2G25730 No alias unknown protein; Has 157 Blast hits to 144 proteins in... 0.17 OrthoFinder output from all 47 species
Adi_g087268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01617 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07096 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Aob_g10942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0682.g082027 No alias not classified & original description: CDS=2223-8297 0.04 OrthoFinder output from all 47 species
Cba_g02120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z229800.1 Ceric.1Z229800 not classified & original description: pacid=50637151... 0.08 OrthoFinder output from all 47 species
Ceric.25G067100.1 Ceric.25G067100 not classified & original description: pacid=50593284... 0.03 OrthoFinder output from all 47 species
Dac_g42193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g37987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08701 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035749001 No alias No description available 0.1 OrthoFinder output from all 47 species
Gb_14991 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g40990.2 LOC_Os01g40990 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10426096g0020 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_10429924g0040 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_350854g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_99199g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Mp3g19740.1 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Ore_g39756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002240 No alias not classified & original description: CDS=107-7096 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003417 No alias not classified & original description: CDS=1-528 0.07 OrthoFinder output from all 47 species
Sam_g27854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo443317 No alias Disease resistance response protein 206 OS=Pisum sativum 0.06 OrthoFinder output from all 47 species
Solyc08g068030.1.1 Solyc08g068030 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g08439 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g20494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020594_P001 Zm00001e020594 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008144 obsolete drug binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!