Sequence Description Alias PCC hrr AMTR_s00060p00033670 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component TOR, evm_27.TU.AmTr_v1.0_scaffold00060.9 0.9576477200002009 1 AMTR_s00106p00133350 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component evm_27.TU.AmTr_v1.0_scaffold00106.104 0.9426152616579161 8 AMTR_s00019p00148170 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein evm_27.TU.AmTr_v1.0_scaffold00019.136 0.9360940120337241 9 AMTR_s00007p00267150 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP107 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00007.380 0.9347756424383856 16 AMTR_s00048p00233710 evm_27.TU.AmTr_v1.0_scaffold00048.233 0.9337922279148979 10 AMTR_s00082p00059940 Protein RST1 OS=Arabidopsis thaliana RST1, evm_27.TU.AmTr_v1.0_scaffold00082.4 0.9332501179363577 29 AMTR_s00198p00028070 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component GCT, evm_27.TU.AmTr_v1.0_scaffold00198.5 0.9278723619300825 13 AMTR_s00126p00106330 Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG2 component ATATG2, ATG2, evm_27.TU.AmTr_v1.0_scaffold00126.49 0.9229386837956939 34 AMTR_s00059p00199900 Protein modification.phosphorylation.atypical kinase families.PIKK kinase TOR, evm_27.TU.AmTr_v1.0_scaffold00059.222 0.9226556329898467 12 AMTR_s00013p00152000 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana GRV2, KAM2, evm_27.TU.AmTr_v1.0_scaffold00013.78 0.9212078905361716 22 AMTR_s00009p00176380 Actin-related protein 9 OS=Oryza sativa subsp. indica ATARP9, ARP9, evm_27.TU.AmTr_v1.0_scaffold00009.107 0.9202574454699257 12 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14, evm_27.TU.AmTr_v1.0_scaffold00046.46 0.9183466980599664 43 AMTR_s00007p00088050 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component ESP4, evm_27.TU.AmTr_v1.0_scaffold00007.52 0.9172455630182929 64 AMTR_s00104p00047720 Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.13 0.916011318056564 18 AMTR_s00140p00029580 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00140.6 0.9159764390123234 33 AMTR_s00004p00267320 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component evm_27.TU.AmTr_v1.0_scaffold00004.268 0.9156356883054807 86 AMTR_s00040p00210200 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component evm_27.TU.AmTr_v1.0_scaffold00040.222 0.9144713660833323 41 AMTR_s00110p00146400 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.121 0.914390589213623 53 AMTR_s00028p00193460 Phytohormones.cytokinin.perception and signal transduction.AHK-type receptor AHK2, HK2, evm_27.TU.AmTr_v1.0_scaffold00028.85 0.9141569669971398 48 AMTR_s00017p00141460 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel evm_27.TU.AmTr_v1.0_scaffold00017.65 0.9137012666791022 37 AMTR_s00268p00016240 Protein modification.phosphorylation.atypical kinase families.PIKK kinase evm_27.TU.AmTr_v1.0_scaffold00268.6 0.9132345525882314 22 AMTR_s00068p00051520 evm_27.TU.AmTr_v1.0_scaffold00068.20 0.912611838262658 23 AMTR_s00029p00113670 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component evm_27.TU.AmTr_v1.0_scaffold00029.124 0.9124063245101953 92 AMTR_s00020p00246930 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic subunits.subunit 2 NRPC2, evm_27.TU.AmTr_v1.0_scaffold00020.118 0.9114113366922949 67 AMTR_s00173p00060580 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00173.16 0.9107176579258197 85 AMTR_s00020p00187990 evm_27.TU.AmTr_v1.0_scaffold00020.72 0.9098103645433798 27 AMTR_s00078p00166420 Protein degradation.peptidase families.metallopeptidase activities.carboxypeptidase activities.SOL carboxypeptidase evm_27.TU.AmTr_v1.0_scaffold00078.156 0.909747117803147 28 AMTR_s00029p00083380 evm_27.TU.AmTr_v1.0_scaffold00029.77 0.9093133857766166 29 AMTR_s00007p00201600 E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.177 0.9085541025798647 79 AMTR_s01224p00002240 evm_27.TU.AmTr_v1.0_scaffold01224.1 0.9080798966030347 34 AMTR_s00086p00132870 evm_27.TU.AmTr_v1.0_scaffold00086.75 0.9070762626936416 33 AMTR_s00142p00090900 emb2410, evm_27.TU.AmTr_v1.0_scaffold00142.59 0.9063660889136914 34 AMTR_s00048p00149840 Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.102 0.906156722184144 74 AMTR_s00089p00070210 Pentatricopeptide repeat-containing protein At5g15280, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00089.28 0.9032194198536755 39 AMTR_s00078p00196690 evm_27.TU.AmTr_v1.0_scaffold00078.206 0.9017286032023041 41 AMTR_s00067p00104300 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REA1 assembly factor (MDN1) evm_27.TU.AmTr_v1.0_scaffold00067.84 0.9010845821794399 43 AMTR_s00091p00054030 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00091.11 0.8987906526082634 47 AMTR_s00040p00229490 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.myotubularin lipid phosphatase AtMTM1, MTM1, evm_27.TU.AmTr_v1.0_scaffold00040.275 0.8985562934952849 49 AMTR_s00071p00142490 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein UPF1, ATUPF1, LBA1, evm_27.TU.AmTr_v1.0_scaffold00071.128 0.8982289581838597 49 AMTR_s00048p00035310 evm_27.TU.AmTr_v1.0_scaffold00048.9 0.8964549861171195 52 AMTR_s00079p00078710 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor ATHPCAT2, HAC1, ATHAC1, PCAT2, evm_27.TU.AmTr_v1.0_scaffold00079.26 0.8964420723894283 53 AMTR_s00043p00149000 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG2, ATXR3, evm_27.TU.AmTr_v1.0_scaffold00043.28 0.8958483509436111 57 AMTR_s00090p00148990 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor SYD, CHR3, evm_27.TU.AmTr_v1.0_scaffold00090.83 0.8951074349441553 58 AMTR_s00007p00263470 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.340 0.8942839086971511 70 AMTR_s00110p00152340 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-II complex-specific components.TRS130/CLUB component CLUB, AtTRS130, evm_27.TU.AmTr_v1.0_scaffold00110.129 0.8939633399973955 60 AMTR_s00009p00267690 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.CPL1/2 phosphatase ATCPL1, CPL1, FRY2, evm_27.TU.AmTr_v1.0_scaffold00009.409 0.8930229061509962 76 AMTR_s00081p00135280 evm_27.TU.AmTr_v1.0_scaffold00081.50 0.8926950524255377 71 AMTR_s00037p00179540 RNA processing.RNA decay.exosome complex.associated co-factors.RRP6L exoribonuclease evm_27.TU.AmTr_v1.0_scaffold00037.86 0.8911461873350917 68 AMTR_s00061p00204480 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL1 0.8910819375711584 69 AMTR_s00025p00230340 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.333 0.8903835607624923 73 AMTR_s00084p00036460 evm_27.TU.AmTr_v1.0_scaffold00084.6 0.889915507865654 74 AMTR_s00039p00177200 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.phosphorylation of eIF2-alpha.GCN1 kinase co-activator (ILITHYIA) ILA, evm_27.TU.AmTr_v1.0_scaffold00039.142 0.8893617524792075 75 AMTR_s00002p00260810 DNA damage-binding protein 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.446 0.8889621998691651 80 AMTR_s00055p00165140 Protein modification.N-linked glycosylation.complex N-glycan maturation.beta-1,2-xylosyltransferase XYLT, ATXYLT, evm_27.TU.AmTr_v1.0_scaffold00055.85 0.8854966551065934 92 AMTR_s00078p00055040 RNA biosynthesis.siRNA biogenesis.RDR6 ssRNA polymerase SDE1, RDR6, SGS2, evm_27.TU.AmTr_v1.0_scaffold00078.28 0.8835992903911887 93 AMTR_s00013p00056220 MEI1, evm_27.TU.AmTr_v1.0_scaffold00013.19 0.8830337219775055 96