Aliases : RFC3, evm_27.TU.AmTr_v1.0_scaffold00078.39
No description available
Gene families : OG0007901 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007901_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G17170 | RFC3 | Translation elongation factor EF1B/ribosomal protein S6... | 0.06 | OrthoFinder output from all 47 species | |
Als_g04233 | RFC3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g09513 | RFC3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g11675 | RFC3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01034952001 | RFC3 | No description available | 0.03 | OrthoFinder output from all 47 species | |
MA_9569g0010 | RFC3 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Mp1g05580.1 | RFC3 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g46522 | RFC3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g058190.4.1 | RFC3, Solyc01g058190 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Spa_g04186 | RFC3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e018204_P001 | RFC3, Zm00001e018204 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
MF | GO:0019843 | rRNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0000295 | adenine nucleotide transmembrane transporter activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
MF | GO:0005346 | purine ribonucleotide transmembrane transporter activity | IEP | HCCA |
MF | GO:0005347 | ATP transmembrane transporter activity | IEP | HCCA |
MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0005471 | ATP:ADP antiporter activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | HCCA |
CC | GO:0009507 | chloroplast | IEP | HCCA |
CC | GO:0009536 | plastid | IEP | HCCA |
MF | GO:0015093 | ferrous iron transmembrane transporter activity | IEP | HCCA |
MF | GO:0015215 | nucleotide transmembrane transporter activity | IEP | HCCA |
MF | GO:0015216 | purine nucleotide transmembrane transporter activity | IEP | HCCA |
MF | GO:0015217 | ADP transmembrane transporter activity | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
MF | GO:0015605 | organophosphate ester transmembrane transporter activity | IEP | HCCA |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000529 | Ribosomal_S6 | 149 | 238 |
No external refs found! |