1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00077p00082450

AMTR_s00077p00082450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00077.65

No description available


Gene families : OG0003760 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003760_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00077p00082450
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Adi_g056717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g081586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g12168 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0155.g053651 No alias not classified & original description: CDS=1-1428 0.03 OrthoFinder output from all 47 species
Dcu_g31494 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01024560001 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os01g74620.1 LOC_Os01g74620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g38465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g49653 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_6732g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g23621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo440605 No alias No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA

No InterPro domains available for this sequence

No external refs found!