AMTR_s00075p00158590 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00075.46

Description : ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana

Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00075p00158590

Target	Alias	Description	ECC score	Gene Family Method
Adi_g024938	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g061008	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17601	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0009.g011959	No alias	not classified & original description: CDS=1-2292	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000769.10	No alias	Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Ehy_g04006	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01012038001	No alias	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species
LOC_Os02g51400.1	LOC_Os02g51400	ATPase family AAA domain-containing protein FIGL1...	0.02	OrthoFinder output from all 47 species
Len_g20901	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g22112	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_181094g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Tin_g13557	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	485	615

External Links

No external refs found!