- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00071.84
Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00038p00046180 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G53840 | PME1, ATPME1 | pectin methylesterase 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G10710 | RHS12 | root hair specific 12 | 0.06 | OrthoFinder output from all 47 species | |
| AT3G14300 | PME26, ATPMEPCRC, ATPME26 | pectinesterase family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G47400 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | OrthoFinder output from all 47 species | |
| AT3G59010 | PME61 | pectin methylesterase 61 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G02330 | ATPMEPCRB | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | OrthoFinder output from all 47 species | |
| AT4G33220 | PME44, ATPME44 | pectin methylesterase 44 | 0.05 | OrthoFinder output from all 47 species | |
| AT4G33230 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.02 | OrthoFinder output from all 47 species | |
| AT5G04960 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.05 | OrthoFinder output from all 47 species | |
| AT5G09760 | No alias | Plant invertase/pectin methylesterase inhibitor superfamily | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09825 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g12203 | PME1, ATPME1 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26378 | No alias | pectin methylesterase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g05037 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g61345 | ATPMEPCRB | EC_3.1 hydrolase acting on ester bond & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene05823.t1 | Aspi01Gene05823 | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene07382.t1 | Aspi01Gene07382 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene10964.t1 | Aspi01Gene10964 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene11209.t1 | Aspi01Gene11209 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene36660.t1 | ATPMEPCRF,... | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene39882.t1 | Aspi01Gene39882 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0113.g045942 | ATPMEPCRF, PMEPCRF | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0215.g058412 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s3257.g115118 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.34G021900.1 | Ceric.34G021900 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22798 | PME44, ATPME44 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01562 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g12104 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g13634 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g03889 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04854 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g08601 | ATPME3, PME3 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09100 | ATPME3, PME3 | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g15129 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016667001 | PME1, ATPME1 | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026518001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027652001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028040001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031667001 | PME61 | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037349001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01038546001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_28159 | ATPMEPCRF, PMEPCRF | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g18650.1 | LOC_Os02g18650 | pectin methylesterase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g47830.1 | ATPME3, PME3,... | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10372207g0010 | No alias | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10434002g0010 | No alias | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
| MA_130858g0010 | ATPMEPCRF, PMEPCRF | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| MA_54974g0010 | No alias | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
| Mp6g15150.1 | No alias | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25874 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g01365 | PME44, ATPME44 | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g19794 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19805 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g29006 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g55328 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0086.g018433 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0119.g021277 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0165.g024099 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07927 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Smo114014 | ATPMEPCRF, PMEPCRF | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| Smo420760 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g014300.2.1 | Solyc02g014300 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g083870.4.1 | Solyc03g083870 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g123620.4.1 | PME1, ATPME1,... | pectin methylesterase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g047590.4.1 | Solyc05g047590 | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g017600.3.1 | PME44, ATPME44,... | pectin methylesterase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g075330.4.1 | Solyc09g075330 | pectin methylesterase | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g01966 | ATPME2, PME2 | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06048 | No alias | EC_3.1 hydrolase acting on ester bond & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017515_P001 | ATPME2, PME2,... | pectin methylesterase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022184_P001 | PME44, ATPME44,... | pectin methylesterase | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e035838_P001 | Zm00001e035838 | pectin methylesterase | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEA | Interproscan |
| CC | GO:0005618 | cell wall | IEA | Interproscan |
| MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
| BP | GO:0042545 | cell wall modification | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006284 | base-excision repair | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006721 | terpenoid metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | HCCA |
| BP | GO:0016108 | tetraterpenoid metabolic process | IEP | HCCA |
| BP | GO:0016109 | tetraterpenoid biosynthetic process | IEP | HCCA |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | HCCA |
| BP | GO:0016116 | carotenoid metabolic process | IEP | HCCA |
| BP | GO:0016117 | carotenoid biosynthetic process | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| No external refs found! |