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  5. AMTR_s00069p00097470

AMTR_s00069p00097470 (RBL2, ATRBL2,...)


Aliases : RBL2, ATRBL2, evm_27.TU.AmTr_v1.0_scaffold00069.61

Description : Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00069p00097470
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.03 OrthoFinder output from all 47 species
Adi_g076570 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07982 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39472 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49914 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60828 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09696 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16164 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14749 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010602001 RBL2, ATRBL2 Protein degradation.peptidase families.serine-type... 0.04 OrthoFinder output from all 47 species
GSVIVT01017301001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01019824001 RBL2, ATRBL2 Protein degradation.peptidase families.serine-type... 0.05 OrthoFinder output from all 47 species
LOC_Os10g37760.1 RBL2, ATRBL2,... protease (RBL) 0.07 OrthoFinder output from all 47 species
Mp6g05540.1 RBL1, ATRBL1 protease (RBL) 0.05 OrthoFinder output from all 47 species
Msp_g00496 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00556 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43017 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61050 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010272 RBL1, ATRBL1 protease *(RBL) & original description: CDS=374-1408 0.03 OrthoFinder output from all 47 species
Solyc06g005580.4.1 RBL1, ATRBL1,... protease (RBL) 0.04 OrthoFinder output from all 47 species
Tin_g14488 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15295 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002140_P002 RBL2, ATRBL2,... protease (RBL) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 115 217
No external refs found!