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  5. AMTR_s00065p00179210

AMTR_s00065p00179210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.150

Description : U-box domain-containing protein 13 OS=Arabidopsis thaliana


Gene families : OG0000797 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000797_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00179210

Target Alias Description ECC score Gene Family Method Actions
Adi_g055011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035888 No alias not classified & original description: CDS=631-1827 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001366.12 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_35735 No alias U-box domain-containing protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os01g02200.1 LOC_Os01g02200 U-box domain-containing protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g49810.1 LOC_Os05g49810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo64442 No alias U-box domain-containing protein 12 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!