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  5. AMTR_s00065p00131880

AMTR_s00065p00131880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00065.86

No description available


Gene families : OG0009171 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009171_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00065p00131880
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G58420 No alias Uncharacterised conserved protein UCP031279 0.04 OrthoFinder output from all 47 species
AT4G37700 No alias unknown protein; Has 64 Blast hits to 64 proteins in 11... 0.03 OrthoFinder output from all 47 species
GSVIVT01009317001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g52020.1 LOC_Os03g52020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g55980.1 LOC_Os03g55980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g03170.1 LOC_Os07g03170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g25264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_155878g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_19212g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_69335g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g16847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g092180.1.1 Solyc02g092180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005814_P001 Zm00001e005814 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e011543_P001 Zm00001e011543 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e027395_P001 Zm00001e027395 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!