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  5. AMTR_s00060p00096990

AMTR_s00060p00096990 (atnudt17, NUDT17,...)


Aliases : atnudt17, NUDT17, evm_27.TU.AmTr_v1.0_scaffold00060.41

Description : Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0001213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001213_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00060p00096990

Target Alias Description ECC score Gene Family Method Actions
AT1G18300 NUDT4, atnudt4 nudix hydrolase homolog 4 0.06 OrthoFinder output from all 47 species
AT1G73540 atnudt21, NUDT21 nudix hydrolase homolog 21 0.06 OrthoFinder output from all 47 species
GSVIVT01008469001 atnudt17, NUDT17 Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011668001 NUDT18, atnudt18 Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os06g14420.1 atnudt21,... Nudix hydrolase 21, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g04113 atnudt16, NUDT16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g118470.4.1 atnudt17,... Nudix hydrolase 17, mitochondrial OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g28610 atnudt16, NUDT16 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000086 NUDIX_hydrolase_dom 20 144
No external refs found!