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  5. AMTR_s00058p00201770

AMTR_s00058p00201770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.205

No description available


Gene families : OG0001460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00201770

Target Alias Description ECC score Gene Family Method Actions
AT2G27180 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Aob_g33530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18047 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g45160.1 LOC_Os01g45160 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g41030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_87798g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g13159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g062840.1.1 Solyc12g062840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g42660 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!