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Aliases : SEB1, COBL7, ATSEB1, evm_27.TU.AmTr_v1.0_scaffold00057.89
Description : Cell wall.cellulose.synthesis.cellulose microfibrils and hemicellulose interaction.COB-type protein
Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00083860 | COB,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00182490 | COBL10,... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G02210 | COBL1 | COBRA-like protein 1 precursor | 0.04 | OrthoFinder output from all 47 species | |
| AT5G15630 | IRX6, COBL4 | COBRA-like extracellular glycosyl-phosphatidyl... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g021949 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g021950 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g115193 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g10925 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g36598 | IRX6, COBL4 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02423 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g04400 | COBL11 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g46102 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g48554 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11523 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18626 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene09022.t1 | COBL1, Aspi01Gene09022 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene11127.t1 | SEB1, COBL7,... | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene35118.t1 | COBL2, Aspi01Gene35118 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene68529.t1 | COBL2, Aspi01Gene68529 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0018.g014792 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G025100.1 | COBL2, Ceric.25G025100 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g40673 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g00771 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09126 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01012641001 | COBL10 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035050001 | SEB1, COBL7, ATSEB1 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01036566001 | COB | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_17724 | COB | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25603 | COBL1 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32178 | SEB1, COBL7, ATSEB1 | COB cellulose microfibrils and hemicellulose interaction protein | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g18910.1 | SEB1, COBL7,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g30250.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g49080.1 | SEB1, COBL7,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Len_g16254 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g38435 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| MA_106654g0010 | COB | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g17600.1 | COBL11 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g18890.1 | COBL10 | COB cellulose microfibrils and hemicellulose interaction protein | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g06029 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g28453 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g00548 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11776 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c4_14561V3.1 | Pp3c4_14561 | No annotation | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0223.g026278 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g065530.3.1 | SEB1, COBL7,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g114890.4.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g006450.3.1 | COBL10, Solyc10g006450 | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g52938 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12012 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g40847 | IRX6, COBL4 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e001386_P001 | SEB1, COBL7,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e038043_P001 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | HCCA |
| MF | GO:0004143 | diacylglycerol kinase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006595 | polyamine metabolic process | IEP | HCCA |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | HCCA |
| BP | GO:0006597 | spermine biosynthetic process | IEP | HCCA |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | HCCA |
| BP | GO:0007205 | protein kinase C-activating G protein-coupled receptor signaling pathway | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008215 | spermine metabolic process | IEP | HCCA |
| BP | GO:0008216 | spermidine metabolic process | IEP | HCCA |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0042401 | biogenic amine biosynthetic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006918 | COBRA_pln | 225 | 404 |
| No external refs found! |