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  5. AMTR_s00056p00184430

AMTR_s00056p00184430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.164

No description available


Gene families : OG0003800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00184430

Target Alias Description ECC score Gene Family Method Actions
AT5G50340 No alias ATP-dependent peptidases;nucleotide binding;serine-type... 0.02 OrthoFinder output from all 47 species
Adi_g052199 No alias RecA-activity effector *(RadA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06273 No alias RecA-activity effector *(RadA) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24379 No alias RecA-activity effector *(RadA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19014 No alias RecA-activity effector *(RadA) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g05820.1 LOC_Os06g05820 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g38249 No alias RecA-activity effector *(RadA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_84997g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g47628 No alias RecA-activity effector *(RadA) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19291 No alias RecA-activity effector *(RadA) & original description: none 0.02 OrthoFinder output from all 47 species
Smo416615 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!