AMTR_s00056p00161450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.139

No description available


Gene families : OG0001281 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001281_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00161450

Target Alias Description ECC score Gene Family Method Actions
Adi_g010390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g020989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g109890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38747.t1 Aspi01Gene38747 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47504.t1 Aspi01Gene47504 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1467.g103473 No alias not classified & original description: CDS=933-2456 0.03 OrthoFinder output from all 47 species
Dac_g12819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38745 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g02698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015278001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_39789 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021494 No alias not classified & original description: CDS=2307-3770 0.02 OrthoFinder output from all 47 species
Zm00001e011942_P002 Zm00001e011942 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040165_P001 Zm00001e040165 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR010410 DUF1005 1 178
No external refs found!