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  5. AMTR_s00051p00071560

AMTR_s00051p00071560 (TMM, AtRLP17,...)


Aliases : TMM, AtRLP17, evm_27.TU.AmTr_v1.0_scaffold00051.26

Description : Phytohormones.signalling peptides.CRP (cysteine-rich-peptide) category.EPF/EPFL family.TMM peptide receptor


Gene families : OG0012146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00051p00071560
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene09216.t1 TMM, AtRLP17,... EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G070200.1 TMM, AtRLP17,... EPF-peptide co-receptor *(TMM) & original description:... 0.04 OrthoFinder output from all 47 species
MA_59830g0010 TMM, AtRLP17 EPF-peptide receptor (TMM) 0.09 OrthoFinder output from all 47 species
Pp3c3_3780V3.1 TMM, AtRLP17, Pp3c3_3780 Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
Solyc12g042760.1.1 TMM, AtRLP17,... EPF-peptide receptor (TMM) 0.04 OrthoFinder output from all 47 species
Zm00001e020427_P001 TMM, AtRLP17,... EPF-peptide receptor (TMM) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 350 372
IPR001611 Leu-rich_rpt 253 275
No external refs found!