AMTR_s00050p00205080 (BAM1, BMY7, TR-BAMY,...)

Aliases : BAM1, BMY7, TR-BAMY, evm_27.TU.AmTr_v1.0_scaffold00050.65

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.beta amylase

Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00050p00205080

Target	Alias	Description	ECC score	Gene Family Method
AT3G23920	BAM1, BMY7, TR-BAMY	beta-amylase 1	0.05	OrthoFinder output from all 47 species
AT4G17090	BMY8, BAM3, CT-BMY	chloroplast beta-amylase	0.04	OrthoFinder output from all 47 species
Adi_g013459	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g17221	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g05070	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g06607	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g15788	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene25032.t1	BAM1, BMY7,...	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0319.g064428	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: CDS=328-2121	0.02	OrthoFinder output from all 47 species
Ceric.02G049300.1	BAM1, BMY7,...	EC_3.2 glycosylase & original description:...	0.03	OrthoFinder output from all 47 species
Cre06.g270350	BMY8, BAM3, CT-BMY	Carbohydrate metabolism.starch...	0.02	OrthoFinder output from all 47 species
Cre06.g307150	BAM1, BMY7, TR-BAMY	Carbohydrate metabolism.starch...	0.02	OrthoFinder output from all 47 species
Ehy_g05980	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Gb_02987	BMY8, BAM3, CT-BMY	Beta-amylase 3, chloroplastic OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Gb_26014	BMY8, BAM3, CT-BMY	beta amylase	0.03	OrthoFinder output from all 47 species
LOC_Os10g41550.1	BMY8, BAM3,...	beta amylase	0.04	OrthoFinder output from all 47 species
Len_g08375	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g19095	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Len_g22821	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g30972	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
MA_124514g0010	BAM1, BMY7, TR-BAMY	beta amylase	0.03	OrthoFinder output from all 47 species
Msp_g12589	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19045	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g22861	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g12697	BMY8, BAM3, CT-BMY	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022726	BAM1, BMY7, TR-BAMY	EC_3.2 glycosylase & original description: CDS=1-1839	0.02	OrthoFinder output from all 47 species
Solyc01g067660.3.1	BAM9, BMY3,...	beta amylase	0.03	OrthoFinder output from all 47 species
Zm00001e002383_P001	BMY8, BAM3,...	beta amylase	0.02	OrthoFinder output from all 47 species
Zm00001e037830_P001	BMY8, BAM3,...	beta amylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042816	vitamin B6 metabolic process	IEP	HCCA
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	HCCA
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	HCCA
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	HCCA
BP	GO:0046184	aldehyde biosynthetic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001554	Glyco_hydro_14	127	545

External Links

No external refs found!

AMTR_s00050p00205080 (BAM1, BMY7, TR-BAMY,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation