AMTR_s00048p00138890 (PRK,...)

Aliases : PRK, evm_27.TU.AmTr_v1.0_scaffold00048.87

Description : Photosynthesis.calvin cycle.phosphoribulokinase

Gene families : OG0002852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002852_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00048p00138890

Target	Alias	Description	ECC score	Gene Family Method
AT1G32060	PRK	phosphoribulokinase	0.12	OrthoFinder output from all 47 species
Adi_g056165	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
Adi_g085837	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Adi_g101137	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aev_g29723	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
Ala_g06576	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.11	OrthoFinder output from all 47 species
Ala_g08114	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Als_g01723	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.09	OrthoFinder output from all 47 species
Als_g21473	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Als_g21474	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Als_g32752	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aob_g01710	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Aop_g02516	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Aop_g04803	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Aspi01Gene56474.t1	PRK, Aspi01Gene56474	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Aspi01Gene61465.t1	PRK, Aspi01Gene61465	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Azfi_s0029.g024044	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Cba_g02527	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Cba_g19242	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.09	OrthoFinder output from all 47 species
Ceric.1Z108700.1	PRK, Ceric.1Z108700	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Ceric.27G016700.1	PRK, Ceric.27G016700	EC_2.7 transferase transferring phosphorus-containing...	0.11	OrthoFinder output from all 47 species
Ceric.37G044300.1	PRK, Ceric.37G044300	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020904.22	PRK	Photosynthesis.calvin cycle.phosphoribulokinase	0.04	OrthoFinder output from all 47 species
Cre12.g554800	PRK	Photosynthesis.calvin cycle.phosphoribulokinase	0.04	OrthoFinder output from all 47 species
Dac_g07727	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Dac_g11260	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dcu_g01417	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
Dde_g15220	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Dde_g31160	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.09	OrthoFinder output from all 47 species
Ehy_g05671	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Ehy_g07606	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
GSVIVT01011555001	PRK	Photosynthesis.calvin cycle.phosphoribulokinase	0.1	OrthoFinder output from all 47 species
LOC_Os02g47020.1	PRK, LOC_Os02g47020	phosphoribulokinase	0.06	OrthoFinder output from all 47 species
Len_g21709	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Len_g34806	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
Lfl_g01588	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.11	OrthoFinder output from all 47 species
MA_210555g0010	PRK	phosphoribulokinase	0.07	OrthoFinder output from all 47 species
Mp8g03850.1	PRK	phosphoribulokinase	0.07	OrthoFinder output from all 47 species
Msp_g08552	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
Msp_g25020	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.09	OrthoFinder output from all 47 species
Nbi_g41044	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.1	OrthoFinder output from all 47 species
Pir_g04716	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Pir_g56029	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
Pnu_g16624	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pnu_g32933	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ppi_g29082	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Ppi_g29948	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0136.g022401	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Sam_g09475	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.07	OrthoFinder output from all 47 species
Smo182694	PRK	Photosynthesis.calvin cycle.phosphoribulokinase	0.05	OrthoFinder output from all 47 species
Solyc08g076220.3.1	PRK, Solyc08g076220	phosphoribulokinase	0.11	OrthoFinder output from all 47 species
Spa_g06532	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Spa_g21933	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.08	OrthoFinder output from all 47 species
Tin_g03303	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.05	OrthoFinder output from all 47 species
Tin_g30645	PRK	EC_2.7 transferase transferring phosphorus-containing...	0.1	OrthoFinder output from all 47 species
Zm00001e015530_P001	PRK, Zm00001e015530	phosphoribulokinase	0.07	OrthoFinder output from all 47 species
Zm00001e023306_P001	PRK, Zm00001e023306	phosphoribulokinase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	IEA	Interproscan
MF	GO:0016301	kinase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	HCCA
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006536	glutamate metabolic process	IEP	HCCA
BP	GO:0006537	glutamate biosynthetic process	IEP	HCCA
BP	GO:0006544	glycine metabolic process	IEP	HCCA
BP	GO:0006563	L-serine metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	HCCA
MF	GO:0015930	glutamate synthase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
BP	GO:0017004	cytochrome complex assembly	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0030151	molybdenum ion binding	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
MF	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
MF	GO:0050308	sugar-phosphatase activity	IEP	HCCA
MF	GO:0050662	obsolete coenzyme binding	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006083	PRK/URK	65	263

External Links

No external refs found!

AMTR_s00048p00138890 (PRK,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation