AMTR_s00045p00230850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.334

No description available


Gene families : OG0001734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001734_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00230850

Target Alias Description ECC score Gene Family Method Actions
Aev_g43159 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g34556 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69397.t1 Aspi01Gene69397 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71658.t1 Aspi01Gene71658 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71658.t2 Aspi01Gene71658 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.25G016200.1 Ceric.25G016200 not classified & original description: pacid=50593693... 0.04 OrthoFinder output from all 47 species
Ceric.25G016300.1 Ceric.25G016300 not classified & original description: pacid=50593479... 0.08 OrthoFinder output from all 47 species
Dac_g40323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22285 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g14503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037910001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_07741 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_16592 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g34910.1 LOC_Os10g34910 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10430419g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10430454g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_214829g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g12709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo100588 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo89504 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g080800.3.1 Solyc01g080800 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR007541 Uncharacterised_BSP 28 218
No external refs found!