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  5. AMTR_s00045p00199760

AMTR_s00045p00199760 (GH3.9,...)


Aliases : GH3.9, evm_27.TU.AmTr_v1.0_scaffold00045.258

Description : Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana


Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00199760
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G28130 GH3.17 Auxin-responsive GH3 family protein 0.04 OrthoFinder output from all 47 species
AT1G48660 No alias Auxin-responsive GH3 family protein 0.04 OrthoFinder output from all 47 species
AT2G23170 GH3.3 Auxin-responsive GH3 family protein 0.03 OrthoFinder output from all 47 species
AT4G27260 GH3.5, WES1 Auxin-responsive GH3 family protein 0.02 OrthoFinder output from all 47 species
AT5G51470 No alias Auxin-responsive GH3 family protein 0.02 OrthoFinder output from all 47 species
AT5G54510 DFL1, GH3.6 Auxin-responsive GH3 family protein 0.06 OrthoFinder output from all 47 species
Als_g01106 GH3.5, WES1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32269 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00423.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00424.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00425.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00426.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03301.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06626.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06627.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30783.t1 DFL1, GH3.6,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene33576.t1 DFL1, GH3.6,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G002400.1 DFL1, GH3.6,... not classified & original description: pacid=50620356... 0.01 OrthoFinder output from all 47 species
Ceric.08G060800.1 DFL1, GH3.6,... not classified & original description: pacid=50637832... 0.04 OrthoFinder output from all 47 species
Ceric.26G006600.1 GH3.5, WES1,... not classified & original description: pacid=50599333... 0.04 OrthoFinder output from all 47 species
Dac_g30026 GH3.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32800 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44438 GH3.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12600 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g16245 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g25677 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g30628 DFL1, GH3.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027971001 GH3.9 Putative indole-3-acetic acid-amido synthetase GH3.9... 0.04 OrthoFinder output from all 47 species
Gb_00287 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.6... 0.01 OrthoFinder output from all 47 species
Gb_06148 GH3.17 Indole-3-acetic acid-amido synthetase GH3.17... 0.04 OrthoFinder output from all 47 species
Gb_09255 GH3.5, WES1 Indole-3-acetic acid-amido synthetase GH3.5... 0.02 OrthoFinder output from all 47 species
Gb_12335 GH3.5, WES1 Indole-3-acetic acid-amido synthetase GH3.5... 0.02 OrthoFinder output from all 47 species
Gb_23805 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.5... 0.02 OrthoFinder output from all 47 species
Gb_31650 GH3.5, WES1 Indole-3-acetic acid-amido synthetase GH3.5... 0.02 OrthoFinder output from all 47 species
Gb_36596 GH3.17 Indole-3-acetic acid-amido synthetase GH3.17... 0.02 OrthoFinder output from all 47 species
Gb_38023 GH3.5, WES1 Indole-3-acetic acid-amido synthetase GH3.5... 0.04 OrthoFinder output from all 47 species
LOC_Os11g32510.1 GH3.17, LOC_Os11g32510 Indole-3-acetic acid-amido synthetase GH3.17... 0.03 OrthoFinder output from all 47 species
Len_g21053 DFL1, GH3.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39621 GH3.5, WES1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432413g0020 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.6... 0.03 OrthoFinder output from all 47 species
MA_10434772g0010 DFL1, GH3.6 indole-3-acetic acid-amido synthetase 0.03 OrthoFinder output from all 47 species
Msp_g28987 DFL1, GH3.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43816 DFL1, GH3.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13938 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.02 OrthoFinder output from all 47 species
Ore_g11120 GH3.5, WES1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14022 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g01118 DFL1, GH3.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g064810.1.1 GH3.1, Solyc02g064810 Probable indole-3-acetic acid-amido synthetase GH3.1... 0.02 OrthoFinder output from all 47 species
Solyc02g064830.4.1 GH3.1, Solyc02g064830 indole-3-acetic acid-amido synthetase 0.03 OrthoFinder output from all 47 species
Solyc02g092820.4.1 GH3.1, Solyc02g092820 indole-3-acetic acid-amido synthetase 0.02 OrthoFinder output from all 47 species
Solyc07g063850.3.1 DFL1, GH3.6,... indole-3-acetic acid-amido synthetase 0.03 OrthoFinder output from all 47 species
Solyc10g006610.4.1 DFL1, GH3.6,... Indole-3-acetic acid-amido synthetase GH3.6... 0.03 OrthoFinder output from all 47 species
Spa_g04008 GH3.5, WES1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g04100 GH3.17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06910 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12866 DFL1, GH3.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09110 GH3.5, WES1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011159_P002 GH3.17, Zm00001e011159 Indole-3-acetic acid-amido synthetase GH3.17... 0.02 OrthoFinder output from all 47 species
Zm00001e019720_P002 GH3.1, Zm00001e019720 indole-3-acetic acid-amido synthetase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004993 GH3 12 557
No external refs found!