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  5. AMTR_s00045p00168010

AMTR_s00045p00168010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00045.197

Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG0011629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00045p00168010
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00166p00053380 LAS, SCL18,... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
Solyc01g079370.4.1 Solyc01g079370 transcription factor (GRAS). MIG1 GRAS-type transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 5 223
No external refs found!