Heatmap: Cluster_65 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00237870 (evm_27.TU.AmTr_v1.0_scaffold00001.265)
-5.0 1.79 1.02 -5.49 -4.24 -1.9 - - -7.28 -6.55 -1.99 -1.43 -0.83 -2.14 -5.01 -2.58 -2.86 2.91 2.73 -2.86 - -4.28
AMTR_s00001p00272330 (evm_27.TU.AmTr_v1.0_scaffold00001.517)
- - - - 0.74 - - - - -2.29 - - -0.72 -0.08 2.09 - 0.33 2.27 2.88 -0.23 - -
-7.29 -3.96 -7.49 -8.86 -3.31 - -6.21 -6.19 -4.56 -5.31 0.25 0.57 0.66 -3.3 1.37 -0.56 -1.64 3.12 1.9 -0.35 -1.62 -1.97
AMTR_s00002p00270800 (evm_27.TU.AmTr_v1.0_scaffold00002.598)
-3.26 -2.52 -2.11 -1.45 -4.51 - -11.2 -6.47 -4.02 -4.61 0.36 0.61 0.22 -4.22 -3.58 -1.84 -0.36 3.34 1.77 -0.16 0.35 -4.1
AMTR_s00003p00068920 (evm_27.TU.AmTr_v1.0_scaffold00003.38)
- - - - -15.73 - - - - - - - - 1.13 - - - - 3.61 2.54 - 0.84
-0.93 -2.17 -1.49 -0.41 -4.69 -5.49 - - -6.79 -9.56 -0.23 -1.48 0.78 0.89 -1.7 1.14 -0.91 2.53 2.17 0.88 -2.82 -8.2
AMTR_s00004p00224910 (evm_27.TU.AmTr_v1.0_scaffold00004.218)
- - - - 1.41 - - - - - - - -1.51 - - - - 2.68 3.65 - - -
AMTR_s00004p00262490 (evm_27.TU.AmTr_v1.0_scaffold00004.261)
- - - - 2.59 - - - - - - - - 0.22 -1.58 - - - 3.85 - - -
AMTR_s00019p00186550 (evm_27.TU.AmTr_v1.0_scaffold00019.203)
- - - -1.94 -0.01 - - - - - - - -0.68 - - - 2.71 - 3.68 -0.33 - -
AMTR_s00019p00209400 (evm_27.TU.AmTr_v1.0_scaffold00019.253)
-1.07 0.34 1.4 -5.31 -0.24 -4.19 -7.78 - -7.82 -6.63 0.3 0.65 1.06 -2.52 -2.39 -6.11 -3.3 2.76 1.94 -1.35 -1.85 -5.32
AMTR_s00022p00234200 (evm_27.TU.AmTr_v1.0_scaffold00022.321)
- - - - 0.2 - - - - - - - - - - - - - 4.38 - - -
AMTR_s00024p00166170 (evm_27.TU.AmTr_v1.0_scaffold00024.121)
-1.49 -3.17 -3.88 - -4.92 - -8.77 - -9.66 -11.4 -3.09 -1.3 1.16 0.75 -0.81 0.83 -1.44 1.74 2.93 0.98 0.3 -3.27
AMTR_s00025p00019900 (evm_27.TU.AmTr_v1.0_scaffold00025.3)
- - - - 2.13 -2.33 - - - - - - - - 2.08 - - - 3.72 - - -
AMTR_s00027p00175370 (evm_27.TU.AmTr_v1.0_scaffold00027.55)
- -3.37 0.17 - -8.55 - - - -1.44 -2.41 -0.77 -1.01 -1.85 -4.32 -5.09 -6.28 1.19 3.11 2.76 0.04 - -6.11
AMTR_s00032p00244440 (evm_27.TU.AmTr_v1.0_scaffold00032.290)
-1.91 - -2.63 - -0.54 - -1.69 - -0.91 -2.48 - - 0.87 0.9 -0.02 - - - 3.57 1.41 - -0.6
-7.92 -0.27 -0.96 -4.71 -4.57 -6.07 -7.27 - -5.05 -5.27 -0.18 -0.48 -0.66 -4.94 -4.37 -1.07 -0.02 3.39 2.19 -0.97 -0.47 -1.17
AMTR_s00041p00194550 (evm_27.TU.AmTr_v1.0_scaffold00041.169)
-3.84 -3.33 -9.2 -9.69 -5.85 -9.12 -14.85 - - - 0.49 -0.56 -1.34 -10.54 -2.88 -9.77 -5.67 3.83 2.31 -8.96 -10.56 -6.55
- - - -6.96 -6.41 - -6.62 - -7.65 - -1.88 -1.53 -1.96 -3.55 -0.77 - -2.9 3.2 2.19 2.45 -0.0 -4.83
- - -9.43 - -12.95 - -10.05 - -9.09 -11.49 -3.25 -2.29 -10.4 -12.31 -11.07 -10.71 -0.89 3.16 3.56 -2.34 -2.38 -12.31
AMTR_s00045p00167950 (evm_27.TU.AmTr_v1.0_scaffold00045.196)
- - - - -0.46 - - - - - - -0.21 -1.96 -4.72 - - - 2.77 3.43 -0.81 -0.55 0.3
AMTR_s00045p00168010 (evm_27.TU.AmTr_v1.0_scaffold00045.197)
- - - - -1.63 - - - - - - - -1.43 - -2.53 - - 2.66 3.61 -1.64 0.18 0.25
AMTR_s00045p00217950 (evm_27.TU.AmTr_v1.0_scaffold00045.308)
- - - - -1.36 - 0.47 - -0.25 0.08 - - -1.99 -2.56 -2.65 0.84 0.26 2.79 2.82 -0.71 - -2.41
AMTR_s00053p00223450 (evm_27.TU.AmTr_v1.0_scaffold00053.178)
- - - - 3.02 - - - - - - - - - - - - - 3.8 - - -
AMTR_s00054p00218090 (evm_27.TU.AmTr_v1.0_scaffold00054.89)
- - - - 1.07 - - - - - - - - - - - - - 4.31 - - -
AMTR_s00055p00163710 (evm_27.TU.AmTr_v1.0_scaffold00055.83)
-1.4 0.54 0.17 0.86 -6.9 -5.83 -11.95 -10.15 - - 0.48 0.43 -5.34 -8.1 0.98 - -0.37 1.18 3.09 -2.36 -8.7 -0.5
-0.28 -0.15 0.69 -9.72 -3.65 -6.31 -0.7 - -2.06 -2.32 -0.29 -1.49 -0.11 0.39 -3.15 -1.01 0.7 2.47 1.29 1.83 -2.3 -3.03
AMTR_s00061p00148300 (evm_27.TU.AmTr_v1.0_scaffold00061.131)
1.15 -0.76 1.13 - -2.67 -3.26 -8.07 - -7.45 -7.39 0.88 0.82 -1.01 -7.49 -3.84 - -0.99 3.02 1.97 - - -
AMTR_s00066p00062130 (evm_27.TU.AmTr_v1.0_scaffold00066.37)
-1.49 -0.9 -6.14 -1.12 0.56 - -9.59 -3.09 -5.55 -7.61 -0.35 -0.73 -1.11 -5.01 -3.98 -0.87 0.32 3.09 2.08 -0.08 0.42 -1.84
0.34 - 0.18 -3.48 -1.99 -4.14 -5.91 - -4.64 -4.61 0.59 1.3 -0.01 -2.02 -2.7 0.14 -0.66 2.51 2.07 -0.64 0.11 -1.34
AMTR_s00072p00115340 (evm_27.TU.AmTr_v1.0_scaffold00072.58)
- - - - -2.21 - -5.64 - 1.38 -0.92 -0.45 - -2.3 -5.41 -3.32 - 0.36 3.34 2.48 -1.46 - -2.54
- -6.19 -2.03 - -6.17 -3.3 -5.26 - -6.49 -7.87 -2.76 -1.01 -7.0 -6.05 - - -4.42 3.13 3.55 -3.69 -1.68 -
AMTR_s00078p00077310 (evm_27.TU.AmTr_v1.0_scaffold00078.49)
- - - - 2.17 - -6.28 - -6.72 -6.56 -1.69 1.97 0.29 1.66 0.42 - -3.47 - 2.62 -2.7 - 0.17
AMTR_s00122p00026080 (evm_27.TU.AmTr_v1.0_scaffold00122.10)
-3.65 -6.15 -6.36 -10.63 -5.1 - -11.5 - -11.59 -12.43 0.96 2.39 -1.35 -4.28 -2.38 -2.09 -0.78 2.73 2.4 -0.67 -0.61 -4.75
AMTR_s00161p00072020 (evm_27.TU.AmTr_v1.0_scaffold00161.28)
- - - - 0.31 - - -6.47 - - -1.36 0.21 -1.59 -1.58 -0.39 -1.41 -0.75 2.82 2.42 0.57 0.26 0.76
AMTR_s00161p00072840 (evm_27.TU.AmTr_v1.0_scaffold00161.30)
- - - - -2.18 - - - - - -2.39 -0.64 -2.88 -1.53 0.45 - -1.17 3.49 2.26 -0.29 - 0.88
-7.26 -6.65 -0.6 -6.83 -10.76 -6.54 -11.64 - - - 0.37 0.44 0.07 -8.99 -6.16 - -2.13 3.42 2.64 -1.39 -6.04 -6.52
- - -0.66 - -6.83 - -9.13 - - - 0.78 0.24 0.74 -7.47 -5.08 -5.2 -2.0 3.25 2.64 -0.61 - -3.52
- - - - 1.55 - -0.95 - - -1.79 - - 0.48 -0.52 -2.33 1.17 - 2.55 2.89 -2.26 - -1.99
AMTR_s00182p00042280 (evm_27.TU.AmTr_v1.0_scaffold00182.22)
- - - - - - - - - - - - -1.06 - - - - - 4.43 - - -
AMTR_s04106p00001740 (evm_27.TU.AmTr_v1.0_scaffold04106.1)
- - - 0.88 1.48 - -0.63 - - -0.63 - - 1.49 - -0.15 - - - 3.63 - - -
AMTR_s04181p00006640 (evm_27.TU.AmTr_v1.0_scaffold04181.1)
-1.12 - - - -1.73 - -5.29 - -3.32 -3.38 - - 0.48 -1.15 -1.71 - - 3.26 1.86 2.3 - -0.43

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.