AMTR_s00045p00145150 (HYH,...)

Aliases : HYH, evm_27.TU.AmTr_v1.0_scaffold00045.153

Description : External stimuli response.light.UV-B light.UV-B signal transduction transcriptional regulator

Gene families : OG0002588 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002588_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00045p00145150
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AT5G11260	TED 5, HY5	Basic-leucine zipper (bZIP) transcription factor family protein	0.05	OrthoFinder output from all 47 species
Ceric.13G093700.1	TED 5, HY5,...	regulatory protein *(HY5) of UV-B signal transduction &...	0.03	OrthoFinder output from all 47 species
Ceric.14G091500.1	HYH, Ceric.14G091500	regulatory protein *(HY5) of UV-B signal transduction &...	0.07	OrthoFinder output from all 47 species
Cre06.g310500	HYH	External stimuli response.light.UV-B light.UV-B signal...	0.02	OrthoFinder output from all 47 species
Dde_g03184	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Ehy_g03125	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Gb_33985	HYH	transcription factor (bZIP)	0.06	OrthoFinder output from all 47 species
LOC_Os02g10860.1	TED 5, HY5,...	transcription factor (bZIP). transcription factor (HY5)....	0.02	OrthoFinder output from all 47 species
Pnu_g18334	HYH	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Tin_g14331	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g15691	TED 5, HY5	regulatory protein *(HY5) of UV-B signal transduction &...	0.02	OrthoFinder output from all 47 species
Zm00001e037325_P002	TED 5, HY5,...	transcription factor (bZIP). transcription factor (HY5)....	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	74	132

External Links

No external refs found!

AMTR_s00045p00145150 (HYH,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation