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  5. AMTR_s00041p00030040

AMTR_s00041p00030040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00041.12

Description : Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00041p00030040

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00172050 CML39, CML37,... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AMTR_s00126p00123680 evm_27.TU.AmTr_v1... Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g057947 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081282 CML23 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081283 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13968 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02957 CML41 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27911 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35023 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00581 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17306 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07767.t1 Aspi01Gene07767 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40089.t1 Aspi01Gene40089 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40436.t1 TCH2, CML24,... calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g04492 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37370 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G032100.1 Ceric.23G032100 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G026800.1 Ceric.33G026800 calcium sensor *(CML) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g39853 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03528 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09860 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13985 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27059 TCH2, CML24 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_03899 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g04330.1 LOC_Os01g04330 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72080.1 LOC_Os01g72080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os11g04560.1 LOC_Os11g04560 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g04360.1 LOC_Os12g04360 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g13533 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Ore_g01310 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18745 CML41 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g00479 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19481 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27722 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33633 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33634 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005370.3.1 Solyc01g005370 Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc02g091480.1.1 Solyc02g091480 Polcalcin Nic t 1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc03g118810.1.1 Solyc03g118810 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 OrthoFinder output from all 47 species
Solyc04g018110.1.1 Solyc04g018110 Probable calcium-binding protein CML35 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g079755.1.1 Solyc10g079755 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g09952 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27602 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016987_P001 Zm00001e016987 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011992 EF-hand-dom_pair 54 116
IPR011992 EF-hand-dom_pair 130 191
No external refs found!