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  5. AMTR_s00040p00081530

AMTR_s00040p00081530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00040.41

Description : Citrate-binding protein OS=Hevea brasiliensis


Gene families : OG0006876 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00040p00081530
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00082580 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Als_g63079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62773.t1 Aspi01Gene62773 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g52258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g29827 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os12g06830.1 LOC_Os12g06830 Citrate-binding protein OS=Hevea brasiliensis... 0.11 OrthoFinder output from all 47 species
LOC_Os12g06900.1 LOC_Os12g06900 Citrate-binding protein OS=Hevea brasiliensis... 0.08 OrthoFinder output from all 47 species
LOC_Os12g07310.1 LOC_Os12g07310 Citrate-binding protein OS=Hevea brasiliensis... 0.02 OrthoFinder output from all 47 species
Len_g53561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29106 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g25661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024267 No alias not classified & original description: CDS=1-279 0.04 OrthoFinder output from all 47 species
Smo131123 No alias Citrate-binding protein OS=Hevea brasiliensis 0.02 OrthoFinder output from all 47 species
Solyc11g005480.2.1 Solyc11g005480 Citrate-binding protein OS=Hevea brasiliensis... 0.03 OrthoFinder output from all 47 species
Spa_g31718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR014895 Alginate_lyase_2 79 224
No external refs found!