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Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.144
Description : Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana
Gene families : OG0003154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003154_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00039p00181370 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G10340 | No alias | Ankyrin repeat family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G24600 | No alias | Ankyrin repeat family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G31820 | No alias | Ankyrin repeat family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G02620 | ATANK1, ANK1 | ankyrin-like1 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g00597 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025591001 | No alias | Ankyrin repeat-containing protein At5g02620... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01035638001 | No alias | Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g61990.2 | ITN1, LOC_Os01g61990 | Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g50270.1 | LOC_Os02g50270 | Ankyrin repeat-containing protein At2g01680... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10427678g0010 | ITN1 | Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g005240.4.1 | Solyc06g005240 | Ankyrin repeat-containing protein At5g02620... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g066770.3.1 | Solyc08g066770 | Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g084550.3.1 | ITN1, Solyc10g084550 | Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023497_P001 | Zm00001e023497 | Ankyrin repeat-containing protein At2g01680... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0003995 | acyl-CoA dehydrogenase activity | IEP | HCCA |
| MF | GO:0003997 | acyl-CoA oxidase activity | IEP | HCCA |
| CC | GO:0005777 | peroxisome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006635 | fatty acid beta-oxidation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009062 | fatty acid catabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016042 | lipid catabolic process | IEP | HCCA |
| BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016597 | amino acid binding | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| BP | GO:0019395 | fatty acid oxidation | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0030258 | lipid modification | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
| BP | GO:0034440 | lipid oxidation | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| CC | GO:0042579 | microbody | IEP | HCCA |
| MF | GO:0043177 | organic acid binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044242 | cellular lipid catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0052890 | oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |