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  5. AMTR_s00039p00093490

AMTR_s00039p00093490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.50

Description : Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit F


Gene families : OG0003775 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003775_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00039p00093490
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT4G02620 No alias vacuolar ATPase subunit F family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009226 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.03 OrthoFinder output from all 47 species
LOC_Os02g57854.1 LOC_Os02g57854 subunit F of V-type ATPase peripheral V1 subcomplex 0.03 OrthoFinder output from all 47 species
Spa_g19313 No alias subunit F of V-type ATPase peripheral V1 subcomplex &... 0.03 OrthoFinder output from all 47 species
Zm00001e035810_P001 Zm00001e035810 subunit F of V-type ATPase peripheral V1 subcomplex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0034220 monoatomic ion transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR008218 ATPase_V1-cplx_f_g_su 15 115
No external refs found!