Aliases : CAMTA3, SR1, evm_27.TU.AmTr_v1.0_scaffold00038.113
Description : RNA biosynthesis.transcriptional activation.CAMTA transcription factor
Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G22300 | CAMTA3, SR1 | signal responsive 1 | 0.04 | OrthoFinder output from all 47 species | |
AT3G16940 | No alias | calmodulin binding;transcription regulators | 0.02 | OrthoFinder output from all 47 species | |
AT4G16150 | No alias | calmodulin binding;transcription regulators | 0.04 | OrthoFinder output from all 47 species | |
AT5G64220 | No alias | Calmodulin-binding transcription activator protein with... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g022445 | No alias | CAMTA-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g026121 | No alias | CAMTA-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g13747 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g08814 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g03586 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g11078 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene55577.t1 | Aspi01Gene55577 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0117.g046489 | No alias | CAMTA-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0305.g063898 | CAMTA3, SR1 | CAMTA-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g36827 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.12G055700.1 | CAMTA3, SR1,... | CAMTA-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.24G013800.1 | CAMTA3, SR1,... | CAMTA-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.31G019600.1 | Ceric.31G019600 | CAMTA-type transcription factor & original description:... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g09534 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g13973 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g10015 | No alias | CAMTA-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01002635001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01004860001 | CAMTA3, SR1 | RNA biosynthesis.transcriptional activation.CAMTA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010510001 | No alias | RNA biosynthesis.transcriptional activation.CAMTA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01035027001 | No alias | RNA biosynthesis.transcriptional activation.CAMTA... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04014 | No alias | transcription factor (CAMTA) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g69910.1 | LOC_Os01g69910 | transcription factor (CAMTA) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g27080.1 | CAMTA3, SR1,... | transcription factor (CAMTA) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g31900.1 | LOC_Os04g31900 | transcription factor (CAMTA) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g30774.1 | LOC_Os07g30774 | transcription factor (CAMTA) | 0.02 | OrthoFinder output from all 47 species | |
Len_g16770 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g03420 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g34966 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10428975g0010 | No alias | transcription factor (CAMTA) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g17074 | No alias | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g35915 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g27631 | No alias | CAMTA-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0031.g010659 | No alias | CAMTA-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g07183 | No alias | CAMTA-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g105230.4.1 | Solyc01g105230 | transcription factor (CAMTA) | 0.07 | OrthoFinder output from all 47 species | |
Solyc04g056270.4.1 | CAMTA3, SR1,... | transcription factor (CAMTA) | 0.06 | OrthoFinder output from all 47 species | |
Solyc05g015650.3.1 | Solyc05g015650 | transcription factor (CAMTA) | 0.04 | OrthoFinder output from all 47 species | |
Tin_g21019 | CAMTA3, SR1 | CAMTA-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e002794_P002 | CAMTA3, SR1,... | transcription factor (CAMTA) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008367_P002 | Zm00001e008367 | transcription factor (CAMTA) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012888_P005 | CAMTA3, SR1,... | transcription factor (CAMTA) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e018809_P002 | Zm00001e018809 | transcription factor (CAMTA) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e037974_P002 | CAMTA3, SR1,... | transcription factor (CAMTA) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e040752_P001 | Zm00001e040752 | transcription factor (CAMTA) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006094 | gluconeogenesis | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
BP | GO:0019319 | hexose biosynthetic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046364 | monosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No external refs found! |