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  5. AMTR_s00038p00079560

AMTR_s00038p00079560 (PIN7, ATPIN7,...)


Aliases : PIN7, ATPIN7, evm_27.TU.AmTr_v1.0_scaffold00038.35

Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00079560
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 PIN5,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00074690 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
AMTR_s00101p00149240 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
AT1G77110 PIN6 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
Aev_g13338 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26968 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12472 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32565 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01020.t1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04220.t1 PIN3, ATPIN3,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28763.t1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0100.g044237 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G035300.1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g08211 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08494 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011347001 PIN8, ATPIN8 Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
GSVIVT01031663001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Gb_02144 ATPIN1, PIN1 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Gb_06199 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Gb_23207 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Gb_37787 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os01g45550.1 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
LOC_Os01g51780.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os01g58860.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
LOC_Os01g69070.1 PIN5, LOC_Os01g69070 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os05g50140.2 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
LOC_Os06g44970.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
LOC_Os09g32770.1 PIN5, LOC_Os09g32770 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
LOC_Os11g02950.1 PIN5, LOC_Os11g02950 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Len_g27960 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06682 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12533 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40526 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433084g0010 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Pir_g24244 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11165 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26841 No alias auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g059730.3.1 PIN6, Solyc06g059730 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc10g078370.2.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e010118_P004 PIN5, Zm00001e010118 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Zm00001e015800_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e037682_P001 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 7 370
No external refs found!