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  5. AMTR_s00037p00153530

AMTR_s00037p00153530 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00037.70

No description available


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00037p00153530
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Aob_g13220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e035102_P001 Zm00001e035102 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 20 183
No external refs found!