AMTR_s00035p00205430 (AP2, FLO2, FL1,...)

Aliases : AP2, FLO2, FL1, evm_27.TU.AmTr_v1.0_scaffold00035.43

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.AP2-type transcription factor

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00035p00205430
Cluster	HCCA: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
AT2G39250	SNZ	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT4G37750	DRG, CKC, CKC1, ANT	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g058145	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aev_g36629	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ala_g05510	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ala_g07889	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ala_g28572	BBM	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14196	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Als_g14935	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Als_g15824	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g22039	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aop_g07593	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene20942.t2	AP2, FLO2, FL1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0207.g057931	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Cba_g52321	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.10G056200.1	PLT2, Ceric.10G056200	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ceric.26G003300.1	PLT2, Ceric.26G003300	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dac_g06510	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g10361	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Dde_g30317	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dde_g42409	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01016352001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Gb_05487	DRG, CKC, CKC1, ANT	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Gb_11937	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os01g59780.1	WRI1, ATWRI1,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
LOC_Os03g12950.1	DRG, CKC, CKC1,...	no description available(sp\|q84z02\|crl5_orysj : 102.0)	0.03	OrthoFinder output from all 47 species
LOC_Os03g56050.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os03g60430.2	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os04g55560.2	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os05g03040.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.09	OrthoFinder output from all 47 species
LOC_Os07g03250.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
LOC_Os07g13170.2	RAP2.7, TOE1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os11g03540.1	WRI1, ATWRI1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Len_g08830	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g46832	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g17116	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
MA_113625g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_75070g0010	AP2, FLO2, FL1	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
MA_8090186g0010	AP2, FLO2, FL1	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
MA_98095g0010	No alias	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Mp8g11450.1	No alias	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Nbi_g09452	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Pir_g37090	ADAP	RAM1-dependent transcription factor *(WRI5) & original...	0.07	OrthoFinder output from all 47 species
Pir_g44006	RAP2.7, TOE1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Sam_g36453	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Solyc02g064960.3.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Solyc02g092050.3.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Solyc03g123430.4.1	Solyc03g123430	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Solyc04g049800.3.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Solyc11g010710.2.1	PLT3, AIL6,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Tin_g10618	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Tin_g40561	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e000558_P003	Zm00001e000558	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Zm00001e005817_P003	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Zm00001e006752_P001	AP2, FLO2, FL1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Zm00001e011539_P001	DRG, CKC, CKC1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Zm00001e019489_P001	WRI1, ATWRI1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005231	excitatory extracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005234	extracellularly glutamate-gated ion channel activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008066	glutamate receptor activity	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022835	transmitter-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
CC	GO:0030288	outer membrane-bounded periplasmic space	IEP	HCCA
MF	GO:0030594	neurotransmitter receptor activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
CC	GO:0042597	periplasmic space	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	268	318
IPR001471	AP2/ERF_dom	176	225

External Links

No external refs found!

AMTR_s00035p00205430 (AP2, FLO2, FL1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation