AMTR_s00034p00045070 (KCS12,...)


Aliases : KCS12, evm_27.TU.AmTr_v1.0_scaffold00034.6

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase

regulation of protein metabolic process

Gene families : OG0012186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012186_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00034p00045070
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00178p00018030 KCS12,... Lipid metabolism.fatty acid synthesis.fatty acid... 0.07 OrthoFinder output from all 47 species
AT1G07720 KCS3 3-ketoacyl-CoA synthase 3 0.05 OrthoFinder output from all 47 species
AT2G28630 KCS12 3-ketoacyl-CoA synthase 12 0.03 OrthoFinder output from all 47 species
AT5G04530 KCS19 3-ketoacyl-CoA synthase 19 0.02 OrthoFinder output from all 47 species
GSVIVT01005975001 KCS12 Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 OrthoFinder output from all 47 species
GSVIVT01025052001 KCS12 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
LOC_Os03g26530.1 KCS12, LOC_Os03g26530 3-ketoacyl-CoA synthase (KCS) 0.07 OrthoFinder output from all 47 species
LOC_Os10g33370.1 KCS12, LOC_Os10g33370 3-ketoacyl-CoA synthase (KCS) 0.04 OrthoFinder output from all 47 species
Solyc11g072980.1.1 KCS3, Solyc11g072980 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species
Solyc11g072990.1.1 KCS3, Solyc11g072990 3-ketoacyl-CoA synthase (KCS) 0.08 OrthoFinder output from all 47 species
Zm00001e001847_P001 KCS12, Zm00001e001847 3-ketoacyl-CoA synthase (KCS) 0.03 OrthoFinder output from all 47 species
Zm00001e004603_P002 KCS12, Zm00001e004603 3-ketoacyl-CoA synthase (KCS) 0.07 OrthoFinder output from all 47 species
Zm00001e016197_P001 KCS12, Zm00001e016197 3-ketoacyl-CoA synthase (KCS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 35 320
IPR013747 ACP_syn_III_C 335 417
No external refs found!