AMTR_s00032p00241570 (RAN1, HMA7,...)

Aliases : RAN1, HMA7, evm_27.TU.AmTr_v1.0_scaffold00032.280

Description : Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase

Gene families : OG0000698 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000698_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00032p00241570
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
Als_g02589	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species
Dde_g14781	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species
LOC_Os04g46940.1	HMA5, LOC_Os04g46940	P1B-type heavy metal cation-transporting ATPase (HMA)	0.03	OrthoFinder output from all 47 species
Lfl_g10499	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species
Mp3g13400.1	RAN1, HMA7	P1B-type heavy metal cation-transporting ATPase (HMA)	0.04	OrthoFinder output from all 47 species
Msp_g15457	RAN1, HMA7	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.04	OrthoFinder output from all 47 species
Nbi_g04977	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.03	OrthoFinder output from all 47 species
Pnu_g08699	RAN1, HMA7	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.04	OrthoFinder output from all 47 species
Ppi_g09337	RAN1, HMA7	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species
Spa_g12130	HMA5	P1B-type heavy metal cation-transporting ATPase *(HMA) &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0030001	metal ion transport	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030118	clathrin coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030125	clathrin vesicle coat	IEP	HCCA
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	HCCA
CC	GO:0030132	clathrin coat of coated pit	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0050662	obsolete coenzyme binding	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008250	ATPase_P-typ_transduc_dom_A_sf	404	643
IPR023214	HAD_sf	649	887
IPR006121	HMA_dom	133	193
IPR006121	HMA_dom	51	111

External Links

No external refs found!